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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16466 and 16467 are separated by 664 nucleotides
16467 and 16468 are separated by 903 nucleotides
16468 and 16469 are separated by 311 nucleotides
16469 and 16470 are separated by 326 nucleotides
mRNA_8098: 16466 - Hypothetical Protein, at 415,217 to 416,223
16466
mRNA_8099: 16467 - HMMPfam-SUR7/PalI family-PF06687, at 416,888 to 417,757
16467
mRNA_8100: 16468 - BLAST DigA protein [Rhizoctonia solani AG-3 Rhs1AP], at 418,661 to 419,532
16468
mRNA_8101: 16469 - Hypothetical Protein, at 419,844 to 420,309
16469
mRNA_8102: 16470 - Hypothetical Protein, at 420,636 to 421,256
16470
Group
Condition
mRNA
_8098
mRNA
_8099
mRNA
_8100
mRNA
_8101
mRNA
_8102
16466
16467
16468
16469
16470
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.6
-1.7
-0.4
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.8
-0.3
-0.2
-0.4
auxotrophy
Dropout Complete
+0.3
-0.7
-0.2
+0.1
-0.4
growth on ricinoleic acid
YNB Glucose
+0.1
-0.8
-0.6
+0.4
+0.3
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
-0.4
-0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.7
-0.1
-0.5
+0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.5
-0.6
+0.1
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.0
-0.2
-0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.9
+0.2
+0.6
-0.0
auxotrophy
YNB Glucose
+0.1
-0.2
-0.4
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.1
-0.0
+0.0
-0.0
growth on ypd
YPD
+0.7
-1.8
+1.0
-0.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.2
-0.1
+0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.2
-0.1
+0.6
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.2
+0.1
+0.0
+0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.4
-0.4
+0.0
+0.5
growth on oleic acid
YNB Glucose
+0.3
+0.6
-0.2
-0.2
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.3
+0.2
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
+0.2
+0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
+0.3
+0.0
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.6
+0.3
-0.1
+0.6
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