Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16466 and 16467 are separated by 664 nucleotides16467 and 16468 are separated by 903 nucleotides16468 and 16469 are separated by 311 nucleotides16469 and 16470 are separated by 326 nucleotides mRNA_8098: 16466 - Hypothetical Protein, at 415,217 to 416,223 16466 mRNA_8099: 16467 - HMMPfam-SUR7/PalI family-PF06687, at 416,888 to 417,757 16467 mRNA_8100: 16468 - BLAST DigA protein [Rhizoctonia solani AG-3 Rhs1AP], at 418,661 to 419,532 16468 mRNA_8101: 16469 - Hypothetical Protein, at 419,844 to 420,309 16469 mRNA_8102: 16470 - Hypothetical Protein, at 420,636 to 421,256 16470
Group Condition mRNA_8098 mRNA_8099 mRNA_8100 mRNA_8101 mRNA_8102
16466 16467 16468 16469 16470
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.6 -1.7 -0.4 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.8 -0.3 -0.2 -0.4
auxotrophy Dropout Complete +0.3 -0.7 -0.2 +0.1 -0.4
growth on ricinoleic acid YNB Glucose +0.1 -0.8 -0.6 +0.4 +0.3
growth on oleic acid YNB Oleic Acid +0.1 +0.2 -0.4 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.7 -0.1 -0.5 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.5 -0.6 +0.1 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.0 -0.2 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.9 +0.2 +0.6 -0.0
auxotrophy YNB Glucose +0.1 -0.2 -0.4 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 -0.0 +0.0 -0.0
growth on ypd YPD +0.7 -1.8 +1.0 -0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.2 -0.1 +0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 -0.1 +0.6 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 +0.1 +0.0 +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.4 -0.4 +0.0 +0.5
growth on oleic acid YNB Glucose +0.3 +0.6 -0.2 -0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.3 +0.2 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 +0.2 +0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.5 +0.3 +0.0 -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.6 +0.3 -0.1 +0.6
remove
mRNA_8098
plot
remove
mRNA_8099
plot
remove
mRNA_8100
remove
mRNA_8101
plot
remove
mRNA_8102
plot