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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16469 and 16470 are separated by 326 nucleotides
16470 and 16471 are separated by 607 nucleotides
16471 and 16472 are separated by 58 nucleotides
16472 and 16473 are separated by 423 nucleotides
mRNA_8101: 16469 - Hypothetical Protein, at 419,844 to 420,309
16469
mRNA_8102: 16470 - Hypothetical Protein, at 420,636 to 421,256
16470
mRNA_8103: 16471 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 421,864 to 423,445
16471
mRNA_8104: 16472 - Hypothetical Protein, at 423,504 to 424,497
16472
mRNA_8105: 16473 - Hypothetical Protein, at 424,921 to 425,494
16473
Group
Condition
mRNA
_8101
mRNA
_8102
mRNA
_8103
mRNA
_8104
mRNA
_8105
16469
16470
16471
16472
16473
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.8
-0.8
-0.0
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.1
-0.5
+0.0
-0.2
auxotrophy
Dropout Complete
+0.1
-0.4
-0.6
+0.2
-0.0
auxotrophy
YNB Glucose
-0.1
+0.2
-0.4
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
-0.3
-0.1
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.4
-0.2
+0.7
+0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
+0.2
+0.2
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.5
-0.1
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.4
-0.6
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.2
+0.1
-0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
-0.0
-0.0
-0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.0
+0.1
+0.1
+0.1
growth on ypd
YPD
-0.2
+0.3
-0.1
+0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.6
+0.1
-0.3
+0.0
growth on oleic acid
YNB Glucose
-0.2
-0.0
+0.1
+0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.2
-0.3
+0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.5
+0.0
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.5
-0.3
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.1
-0.1
+0.5
-0.1
growth on ricinoleic acid
YNB Glucose
+0.4
+0.3
-0.1
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.0
+0.1
+0.5
+0.2
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