Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16470 and 16471 are separated by 607 nucleotides16471 and 16472 are separated by 58 nucleotides16472 and 16473 are separated by 423 nucleotides16473 and 16474 are separated by 130 nucleotides mRNA_8102: 16470 - Hypothetical Protein, at 420,636 to 421,256 16470 mRNA_8103: 16471 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 421,864 to 423,445 16471 mRNA_8104: 16472 - Hypothetical Protein, at 423,504 to 424,497 16472 mRNA_8105: 16473 - Hypothetical Protein, at 424,921 to 425,494 16473 mRNA_8106: 16474 - K13511 TAZ monolysocardiolipin acyltransferase, at 425,625 to 426,745 16474
Group Condition mRNA_8102 mRNA_8103 mRNA_8104 mRNA_8105 mRNA_8106
16470 16471 16472 16473 16474
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.0 -0.0 -0.4 -2.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.8 -0.0 +0.1 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.1 -0.2 -0.1 -1.5
auxotrophy Dropout Complete -0.4 -0.6 +0.2 -0.0 -0.6
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.6 +0.1 +0.1 -0.8
auxotrophy YNB Glucose +0.2 -0.4 -0.2 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.5 +0.0 -0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 +0.3 +0.2 -0.6
growth on ricinoleic acid YNB Glucose +0.3 -0.1 +0.1 -0.0 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 +0.1 +0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.0 -0.0 +0.0 -0.5
growth on oleic acid YNB Oleic Acid -0.3 +0.2 +0.2 +0.2 -0.2
growth on oleic acid YNB Glucose -0.0 +0.1 +0.4 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2 +0.7 +0.0 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 +0.5 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.1 -0.3 +0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.1 -0.0 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.1 -0.1 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.3 +0.2 +0.1 +0.2
growth on ypd YPD +0.3 -0.1 +0.0 +0.2 +0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.1 +0.5 +0.2 +0.8
remove
mRNA_8102
plot
remove
mRNA_8103
plot
remove
mRNA_8104
remove
mRNA_8105
plot
remove
mRNA_8106
plot