Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16489 and 16490 are separated by 32 nucleotides
16490 and 16491 are separated by 194 nucleotides
16491 and 16492 are separated by 595 nucleotides
16492 and 16493 are separated by 709 nucleotides
mRNA_8121: 16489 - Hypothetical Protein, at 470,033 to 470,823
16489
mRNA_8122: 16490 - K08010 NCF2, P67PHOX neutrophil cytosolic factor 2, at 470,856 to 473,193
16490
mRNA_8123: 16491 - Hypothetical Protein, at 473,388 to 473,878
16491
mRNA_8124: 16492 - HMMPfam-FHA domain-PF00498,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879, at 474,474 to 477,508
16492
mRNA_8125: 16493 - Hypothetical Protein, at 478,218 to 479,543
16493
Group
Condition
mRNA
_8121
mRNA
_8122
mRNA
_8123
mRNA
_8124
mRNA
_8125
16489
16490
16491
16492
16493
ypd buoyancy
40 hrs No Buoyancy Separation
-1.6
+0.3
N.D.
-0.1
-0.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.1
-0.2
N.D.
-0.7
+0.6
growth on ypd
YPD
-0.1
-0.1
N.D.
-0.6
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.7
N.D.
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
-0.1
N.D.
-1.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.1
N.D.
-0.2
-0.7
growth on ricinoleic acid
YNB Glucose
-0.2
-0.3
N.D.
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.1
N.D.
-0.4
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.3
N.D.
+0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.5
N.D.
+0.7
-0.1
auxotrophy
YNB Glucose
+0.3
-0.0
N.D.
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.2
N.D.
-0.4
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.3
N.D.
-0.2
-0.1
growth on oleic acid
YNB Glucose
+0.8
-0.2
N.D.
-0.4
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.2
N.D.
+0.4
-0.4
growth on oleic acid
YNB Oleic Acid
+0.7
-0.2
N.D.
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.6
+0.0
N.D.
-0.3
+0.2
auxotrophy
Dropout Complete
+0.6
+0.2
N.D.
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.9
+0.1
N.D.
+0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.1
N.D.
+0.8
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.8
+0.4
N.D.
-0.4
+0.6
remove
mRNA_8121
plot
remove
mRNA_8122
plot
remove
mRNA_8123
remove
mRNA_8124
plot
remove
mRNA_8125
plot