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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16490 and 16491 are separated by 194 nucleotides
16491 and 16492 are separated by 595 nucleotides
16492 and 16493 are separated by 709 nucleotides
16493 and 16494 are separated by 97 nucleotides
mRNA_8122: 16490 - K08010 NCF2, P67PHOX neutrophil cytosolic factor 2, at 470,856 to 473,193
16490
mRNA_8123: 16491 - Hypothetical Protein, at 473,388 to 473,878
16491
mRNA_8124: 16492 - HMMPfam-FHA domain-PF00498,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879, at 474,474 to 477,508
16492
mRNA_8125: 16493 - Hypothetical Protein, at 478,218 to 479,543
16493
mRNA_8126: 16494 - BLAST putative 15-O-acetyltransferase Tri3 [Moniliophthora ..., at 479,641 to 482,114
16494
Group
Condition
mRNA
_8122
mRNA
_8123
mRNA
_8124
mRNA
_8125
mRNA
_8126
16490
16491
16492
16493
16494
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
-1.0
-0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
N.D.
-0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
-0.2
-0.7
-0.0
growth on ypd
YPD
-0.1
N.D.
-0.6
-0.5
+0.4
growth on oleic acid
YNB Glucose
-0.2
N.D.
-0.4
+0.0
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
N.D.
-0.3
+0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.1
-0.9
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
-0.7
+0.6
-0.2
growth on ricinoleic acid
YNB Glucose
-0.3
N.D.
+0.0
-0.1
-0.1
auxotrophy
YNB Glucose
-0.0
N.D.
-0.1
-0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
N.D.
+0.7
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
-0.3
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
-0.4
+0.4
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
N.D.
+0.1
+0.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
+0.1
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
-0.4
+0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.3
N.D.
-0.2
-0.1
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
+0.4
-0.4
+0.2
auxotrophy
Dropout Complete
+0.2
N.D.
-0.0
+0.2
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
N.D.
-0.4
+0.6
+0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
+0.8
+0.0
+0.3
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