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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16492 and 16493 are separated by 709 nucleotides
16493 and 16494 are separated by 97 nucleotides
16494 and 16495 are separated by 698 nucleotides
16495 and 16496 are separated by 340 nucleotides
mRNA_8124: 16492 - HMMPfam-FHA domain-PF00498,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879, at 474,474 to 477,508
16492
mRNA_8125: 16493 - Hypothetical Protein, at 478,218 to 479,543
16493
mRNA_8126: 16494 - BLAST putative 15-O-acetyltransferase Tri3 [Moniliophthora ..., at 479,641 to 482,114
16494
mRNA_8127: 16495 - BLAST CigA protein-like protein [Phycomyces blakesleean..., at 482,813 to 485,416
16495
mRNA_8128: 16496 - KOG0526 Nucleosome-binding factor SPN, POB3 subunit, at 485,757 to 486,942
16496
Group
Condition
mRNA
_8124
mRNA
_8125
mRNA
_8126
mRNA
_8127
mRNA
_8128
16492
16493
16494
16495
16496
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
-0.2
+0.1
-0.5
N.D.
growth on ypd
YPD
-0.6
-0.5
+0.4
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.7
-0.0
+0.3
N.D.
growth on oleic acid
YNB Oleic Acid
-0.3
+0.2
-0.3
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
+0.6
-0.2
-0.1
N.D.
growth on oleic acid
YNB Glucose
-0.4
+0.0
-0.1
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.0
-0.2
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
+0.0
-0.4
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.9
+0.1
+0.8
N.D.
auxotrophy
YNB Glucose
-0.1
-0.2
+0.1
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.1
+0.3
-0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
+0.3
-0.0
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.2
-0.0
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.4
-0.1
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
-0.1
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.6
+0.6
-0.5
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
-0.1
-0.4
+0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.8
+0.0
+0.3
-0.9
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.4
+0.2
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
+0.0
-0.1
-0.1
+0.6
N.D.
auxotrophy
Dropout Complete
-0.0
+0.2
+0.0
+0.2
N.D.
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