Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16493 and 16494 are separated by 97 nucleotides
16494 and 16495 are separated by 698 nucleotides
16495 and 16496 are separated by 340 nucleotides
16496 and 16497 are separated by 484 nucleotides
mRNA_8125: 16493 - Hypothetical Protein, at 478,218 to 479,543
16493
mRNA_8126: 16494 - BLAST putative 15-O-acetyltransferase Tri3 [Moniliophthora ..., at 479,641 to 482,114
16494
mRNA_8127: 16495 - BLAST CigA protein-like protein [Phycomyces blakesleean..., at 482,813 to 485,416
16495
mRNA_8128: 16496 - KOG0526 Nucleosome-binding factor SPN, POB3 subunit, at 485,757 to 486,942
16496
mRNA_8129: 16497 - KOG0543 FKBP-type peptidyl-prolyl cis-trans isomerase, at 487,427 to 488,552
16497
Group
Condition
mRNA
_8125
mRNA
_8126
mRNA
_8127
mRNA
_8128
mRNA
_8129
16493
16494
16495
16496
16497
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.4
+0.1
N.D.
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.3
-0.9
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.2
+0.2
N.D.
-0.5
growth on oleic acid
YNB Oleic Acid
+0.2
-0.3
-0.2
N.D.
-0.3
growth on ypd
YPD
-0.5
+0.4
-0.6
N.D.
+0.4
auxotrophy
YNB Glucose
-0.2
+0.1
+0.2
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.0
-0.4
N.D.
-0.1
growth on oleic acid
YNB Glucose
+0.0
-0.1
+0.2
N.D.
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.1
-0.5
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
-0.0
+0.3
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.3
-0.0
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
+0.1
N.D.
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
+0.6
N.D.
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
+0.1
+0.8
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
+0.2
+0.2
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.3
-0.1
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
-0.2
-0.1
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.0
+0.2
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.6
+0.6
-0.5
N.D.
-0.2
auxotrophy
Dropout Complete
+0.2
+0.0
+0.2
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.1
+0.3
N.D.
+0.3
remove
mRNA_8125
plot
remove
mRNA_8126
plot
remove
mRNA_8127
remove
mRNA_8128
plot
remove
mRNA_8129
plot