Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16498 and 16499 are separated by 438 nucleotides16499 and 16500 are separated by 309 nucleotides16500 and 16501 are separated by 458 nucleotides16501 and 16502 are separated by 244 nucleotides mRNA_8130: 16498 - BLAST transcription factor [Pseudozyma hubeiensis SY62], at 488,795 to 491,438 16498 mRNA_8131: 16499 - KOG2431 1, 2-alpha-mannosidase, at 491,877 to 495,566 16499 mRNA_8132: 16500 - SUPERFAMILY--SSF52047, at 495,876 to 497,390 16500 mRNA_8133: 16501 - HMMPfam-Senescence-associated protein-PF06911, at 497,849 to 499,471 16501 mRNA_8134: 16502 - K17891 ERV2 FAD-linked sulfhydryl oxidase, at 499,716 to 500,735 16502
Group Condition mRNA_8130 mRNA_8131 mRNA_8132 mRNA_8133 mRNA_8134
16498 16499 16500 16501 16502
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.0 -0.5 +0.1 -0.3
growth on oleic acid YNB Glucose +0.0 +0.2 -0.3 -0.7 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.2 +0.1 -0.5 -0.3
auxotrophy Dropout Complete -0.3 -0.2 -0.4 +0.3 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 +0.0 +0.0 +0.1
growth on oleic acid YNB Oleic Acid +0.4 +0.3 -0.5 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 -0.4 +0.2 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.2 +0.0 +0.7 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +1.2 -0.1 -0.3 -0.4 -0.3
growth on ypd YPD -0.1 +0.5 -0.1 -0.0 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 +0.2 +0.2 +1.4 -0.5
auxotrophy YNB Glucose +0.3 -0.2 -0.3 +0.4 +0.4
growth on ricinoleic acid YNB Glucose +0.8 +0.0 -0.0 +0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.2 -0.4 +0.3 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.4 +0.2 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 +0.4 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.2 -0.1 +0.8 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.4 -0.1 +0.5 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.6 +0.4 +1.5 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.6 +0.1 +0.1 +1.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.0 +0.2 +1.8 +0.2
remove
mRNA_8130
plot
remove
mRNA_8131
plot
remove
mRNA_8132
remove
mRNA_8133
plot
remove
mRNA_8134
plot