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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16501 and 16502 are separated by 244 nucleotides
16502 and 16503 are separated by 136 nucleotides
16503 and 16504 are separated by 211 nucleotides
16504 and 16505 are separated by 737 nucleotides
mRNA_8133: 16501 - HMMPfam-Senescence-associated protein-PF06911, at 497,849 to 499,471
16501
mRNA_8134: 16502 - K17891 ERV2 FAD-linked sulfhydryl oxidase, at 499,716 to 500,735
16502
mRNA_8135: 16503 - K00804 GGPS1 geranylgeranyl diphosphate synthase, type III, at 500,872 to 502,376
16503
mRNA_8136: 16504 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 502,588 to 504,412
16504
mRNA_8137: 16505 - K00586 DPH5 diphthine methyl ester synthase, at 505,150 to 506,230
16505
Group
Condition
mRNA
_8133
mRNA
_8134
mRNA
_8135
mRNA
_8136
mRNA
_8137
16501
16502
16503
16504
16505
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
+0.1
-3.6
-0.6
-3.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.3
-3.4
+0.3
-2.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.3
-0.6
-0.4
-3.8
growth on oleic acid
YNB Glucose
-0.7
-0.3
-1.4
-0.5
-1.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.3
-1.5
-0.2
-1.9
growth on ricinoleic acid
YNB Glucose
+0.0
-0.1
-0.8
-0.4
-2.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.1
-2.9
+0.1
-1.1
auxotrophy
Dropout Complete
+0.3
+0.2
-1.3
+0.1
-2.5
auxotrophy
YNB Glucose
+0.4
+0.4
-1.7
+0.5
-2.2
growth on oleic acid
YNB Oleic Acid
-0.3
+0.1
-1.0
-0.3
-1.1
growth on ypd
YPD
-0.0
+0.0
-1.7
+0.5
-0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.5
-1.9
+0.2
-0.7
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.5
-1.1
+0.3
-1.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.3
-0.6
-0.3
+0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
-0.0
-0.6
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.2
+0.2
-0.1
+1.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.4
+0.1
-0.2
+1.5
ypd buoyancy
40 hrs Low Buoyancy
+1.2
+0.3
+0.9
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+1.8
+0.2
+0.2
+0.3
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+1.4
-0.5
+1.6
+0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
+1.5
+0.3
+0.6
+0.0
+1.9
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