Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16503 and 16504 are separated by 211 nucleotides16504 and 16505 are separated by 737 nucleotides16505 and 16506 are separated by 180 nucleotides16506 and 16507 are separated by 1632 nucleotides mRNA_8135: 16503 - K00804 GGPS1 geranylgeranyl diphosphate synthase, type III, at 500,872 to 502,376 16503 mRNA_8136: 16504 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 502,588 to 504,412 16504 mRNA_8137: 16505 - K00586 DPH5 diphthine methyl ester synthase, at 505,150 to 506,230 16505 mRNA_8138: 16506 - Hypothetical Protein, at 506,411 to 507,790 16506 mRNA_8139: 16507 - K01139 spoT, HDDC3 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, at 509,423 to 510,293 16507
Group Condition mRNA_8135 mRNA_8136 mRNA_8137 mRNA_8138 mRNA_8139
16503 16504 16505 16506 16507
facs on lipid accumulation Sorted Low BODIPY Gate -3.6 -0.6 -3.1 -0.7 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -3.4 +0.3 -2.4 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.4 -3.8 -0.3 -0.0
growth on oleic acid YNB Glucose -1.4 -0.5 -1.7 +0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.8 -0.4 -2.4 +0.2 -0.2
auxotrophy Dropout Complete -1.3 +0.1 -2.5 +0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -2.9 +0.1 -1.1 -0.0 +0.3
auxotrophy YNB Glucose -1.7 +0.5 -2.2 +0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 -0.2 -1.9 -0.1 +0.6
growth on oleic acid YNB Oleic Acid -1.0 -0.3 -1.1 +0.0 +0.4
growth on ypd YPD -1.7 +0.5 -0.4 +0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine -1.9 +0.2 -0.7 +0.9 +0.1
auxotrophy YNB Glucose 75mM Arginine -1.1 +0.3 -1.4 +0.5 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 +0.1 +0.0 -1.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.3 +0.8 -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.3 +0.1 -0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.9 +0.2 -0.1 -0.2 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 +1.5 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +1.2 -0.4 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +1.6 +0.2 +0.2 +0.7 -1.8
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.0 +1.9 -0.4 -0.7
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