Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16505 and 16506 are separated by 180 nucleotides
16506 and 16507 are separated by 1632 nucleotides
16507 and 16508 are separated by 174 nucleotides
16508 and 16509 are separated by 523 nucleotides
mRNA_8137: 16505 - K00586 DPH5 diphthine methyl ester synthase, at 505,150 to 506,230
16505
mRNA_8138: 16506 - Hypothetical Protein, at 506,411 to 507,790
16506
mRNA_8139: 16507 - K01139 spoT, HDDC3 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, at 509,423 to 510,293
16507
mRNA_8140: 16508 - Hypothetical Protein, at 510,468 to 511,367
16508
mRNA_8141: 16509 - Hypothetical Protein, at 511,891 to 512,782
16509
Group
Condition
mRNA
_8137
mRNA
_8138
mRNA
_8139
mRNA
_8140
mRNA
_8141
16505
16506
16507
16508
16509
facs on lipid accumulation
Sorted Low BODIPY Gate
-3.1
-0.7
-0.2
+0.1
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-3.8
-0.3
-0.0
+0.4
-0.4
growth on ricinoleic acid
YNB Glucose
-2.4
+0.2
-0.2
-0.0
-0.8
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.7
-1.8
-0.5
-1.8
facs on lipid accumulation
Sorted High BODIPY Gate
-2.4
-0.2
-0.1
-0.3
+0.1
auxotrophy
YNB Glucose
-2.2
+0.2
-0.2
+0.2
-1.0
auxotrophy
Dropout Complete
-2.5
+0.3
-0.2
+0.0
-0.3
growth on oleic acid
YNB Glucose
-1.7
+0.1
-0.3
-0.2
+0.1
growth on oleic acid
YNB Oleic Acid
-1.1
+0.0
+0.4
-0.3
-0.7
auxotrophy
YNB Glucose 75mM Arginine
-1.4
+0.5
+0.3
-0.2
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.9
-0.1
+0.6
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-1.0
+0.1
-0.7
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
-0.0
+0.3
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.7
+0.9
+0.1
-0.3
-0.8
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
-0.7
+0.4
-0.1
growth on ypd
YPD
-0.4
+0.2
-0.5
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.5
-0.3
-0.3
-1.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
-0.5
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.8
-0.2
-0.2
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.2
-0.4
+0.1
-0.4
+0.2
ypd buoyancy
40 hrs High Buoyancy
+1.9
-0.4
-0.7
+0.1
+0.1
remove
mRNA_8137
plot
remove
mRNA_8138
plot
remove
mRNA_8139
remove
mRNA_8140
plot
remove
mRNA_8141
plot