Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16507 and 16508 are separated by 174 nucleotides
16508 and 16509 are separated by 523 nucleotides
16509 and 16510 are separated by 526 nucleotides
16510 and 16511 are separated by 360 nucleotides
mRNA_8139: 16507 - K01139 spoT, HDDC3 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, at 509,423 to 510,293
16507
mRNA_8140: 16508 - Hypothetical Protein, at 510,468 to 511,367
16508
mRNA_8141: 16509 - Hypothetical Protein, at 511,891 to 512,782
16509
mRNA_8142: 16510 - K06910 K06910 uncharacterized protein, at 513,309 to 514,169
16510
mRNA_8143: 16511 - K01515 nudF ADP-ribose pyrophosphatase, at 514,530 to 515,609
16511
Group
Condition
mRNA
_8139
mRNA
_8140
mRNA
_8141
mRNA
_8142
mRNA
_8143
16507
16508
16509
16510
16511
ypd buoyancy
40 hrs No Buoyancy Separation
-1.8
-0.5
-1.8
+0.7
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-1.0
-0.3
-0.4
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.3
-0.8
-0.6
+0.1
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
-0.8
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.2
-0.6
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.4
+0.2
-0.6
-0.3
auxotrophy
YNB Glucose
-0.2
+0.2
-1.0
+0.0
+0.1
auxotrophy
Dropout Complete
-0.2
+0.0
-0.3
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.7
+0.5
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
+0.4
-0.3
-0.7
-0.1
+0.5
growth on oleic acid
YNB Glucose
-0.3
-0.2
+0.1
+0.0
+0.2
growth on ypd
YPD
-0.5
-0.2
+0.2
+0.5
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.7
+0.4
-0.1
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.2
+0.1
-0.1
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.1
-0.6
+0.5
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.5
+0.3
-0.1
+0.4
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.7
+0.1
+0.1
+0.6
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.3
+0.1
+0.4
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.2
+0.2
-0.1
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.4
-0.4
+0.3
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
+0.3
-0.0
-0.1
+0.6
remove
mRNA_8139
plot
remove
mRNA_8140
plot
remove
mRNA_8141
remove
mRNA_8142
plot
remove
mRNA_8143
plot