Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16509 and 16510 are separated by 526 nucleotides16510 and 16511 are separated by 360 nucleotides16511 and 16512 are separated by 146 nucleotides16512 and 16513 are separated by 134 nucleotides mRNA_8141: 16509 - Hypothetical Protein, at 511,891 to 512,782 16509 mRNA_8142: 16510 - K06910 K06910 uncharacterized protein, at 513,309 to 514,169 16510 mRNA_8143: 16511 - K01515 nudF ADP-ribose pyrophosphatase, at 514,530 to 515,609 16511 mRNA_8144: 16512 - HMMPfam-Domain of unknown function (DUF3506)-PF12014,HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 515,756 to 518,130 16512 mRNA_8145: 16513 - K15304 RANBP3 Ran-binding protein 3, at 518,265 to 522,947 16513
Group Condition mRNA_8141 mRNA_8142 mRNA_8143 mRNA_8144 mRNA_8145
16509 16510 16511 16512 16513
ypd buoyancy 40 hrs No Buoyancy Separation -1.8 +0.7 -0.6 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.8 -0.6 +0.1 -0.4 +0.0
auxotrophy YNB Glucose -1.0 +0.0 +0.1 -0.6 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.1 -0.2 -0.4 -0.1
auxotrophy Dropout Complete -0.3 -0.2 -0.0 -0.3 -0.1
growth on ricinoleic acid YNB Glucose -0.8 -0.2 +0.2 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.4 +0.0 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.6 -0.3 +0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.7 -0.1 +0.5 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.3 +0.0 +0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.5 +0.1 +0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.4 -0.0 -0.1 -0.1
growth on oleic acid YNB Glucose +0.1 +0.0 +0.2 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 +0.3 -0.2 +0.1
growth on ypd YPD +0.2 +0.5 -0.0 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.2 -0.1 -0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 +0.6 +0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.3 +0.4 -0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.6 -0.1 +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.4 +0.0 +0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.1 +0.4 +0.3 +0.1
remove
mRNA_8141
plot
remove
mRNA_8142
plot
remove
mRNA_8143
remove
mRNA_8144
plot
remove
mRNA_8145
plot