Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16510 and 16511 are separated by 360 nucleotides16511 and 16512 are separated by 146 nucleotides16512 and 16513 are separated by 134 nucleotides16513 and 16514 are separated by 208 nucleotides mRNA_8142: 16510 - K06910 K06910 uncharacterized protein, at 513,309 to 514,169 16510 mRNA_8143: 16511 - K01515 nudF ADP-ribose pyrophosphatase, at 514,530 to 515,609 16511 mRNA_8144: 16512 - HMMPfam-Domain of unknown function (DUF3506)-PF12014,HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 515,756 to 518,130 16512 mRNA_8145: 16513 - K15304 RANBP3 Ran-binding protein 3, at 518,265 to 522,947 16513 mRNA_8146: 16514 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729,SUPERFAMILY--SSF55753, at 523,156 to 525,295 16514
Group Condition mRNA_8142 mRNA_8143 mRNA_8144 mRNA_8145 mRNA_8146
16510 16511 16512 16513 16514
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.4 -0.1 -0.9
auxotrophy YNB Glucose +0.0 +0.1 -0.6 -0.1 -0.7
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.1 -0.4 +0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.2 +0.2 +0.1 +0.0 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.6 +0.3 -0.3 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.3 +0.1 +0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.0 +0.1 -0.5 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.4 +0.3 +0.1 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.1 +0.0 -0.2 -0.6
growth on oleic acid YNB Oleic Acid -0.1 +0.5 +0.0 +0.1 -0.6
growth on oleic acid YNB Glucose +0.0 +0.2 -0.4 +0.1 -0.1
auxotrophy Dropout Complete -0.2 -0.0 -0.3 -0.1 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.6 -0.1 +0.1 -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.0 -0.1 -0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.0 +0.3 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.0 -0.0 +0.2 +0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.6 -0.2 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 -0.0 +0.2 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.3 -0.2 +0.1 +0.7
growth on ypd YPD +0.5 -0.0 -0.1 -0.2 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.4 -0.0 +0.3 +0.0
remove
mRNA_8142
plot
remove
mRNA_8143
plot
remove
mRNA_8144
remove
mRNA_8145
plot
remove
mRNA_8146
plot