Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16515 and 16516 are separated by 321 nucleotides16516 and 16517 are separated by 547 nucleotides16517 and 16518 are separated by 160 nucleotides16518 and 16519 are separated by 432 nucleotides mRNA_8147: 16515 - HMMPfam-Enoyl-CoA hydratase/isomerase family-PF00378,SUPERFAMILY--SSF52096, at 525,577 to 526,736 16515 mRNA_8148: 16516 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 527,058 to 528,382 16516 mRNA_8149: 16517 - KOG1198 Zinc-binding oxidoreductase, at 528,930 to 530,418 16517 mRNA_8150: 16518 - K11135 PINX1 Pin2-interacting protein X1, at 530,579 to 532,165 16518 mRNA_8151: 16519 - K19846 SPA2 protein SPA2, at 532,598 to 536,503 16519
Group Condition mRNA_8147 mRNA_8148 mRNA_8149 mRNA_8150 mRNA_8151
16515 16516 16517 16518 16519
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.4 -0.6 N.D. -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.2 -0.8 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 -0.7 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.3 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.0 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 -0.2 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 +0.2 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.0 -0.4 N.D. +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.4 +0.6 N.D. +0.5
growth on ypd YPD +0.3 -0.3 +0.2 N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.2 -1.0 +0.5 N.D. +0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.3 -0.3 N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.8 -0.4 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.3 +0.0 N.D. +0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.6 -0.0 N.D. +1.3
growth on oleic acid YNB Glucose -0.2 +0.3 +0.6 N.D. +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.5 +0.7 N.D. +1.2
auxotrophy YNB Glucose -0.0 +0.8 +0.1 N.D. +0.7
auxotrophy YNB Glucose 75mM Methionine -0.3 +1.2 +0.1 N.D. +0.7
auxotrophy Dropout Complete -0.1 +0.9 +0.3 N.D. +0.6
growth on oleic acid YNB Oleic Acid -0.1 +0.9 +0.8 N.D. +0.7
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