Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16516 and 16517 are separated by 547 nucleotides16517 and 16518 are separated by 160 nucleotides16518 and 16519 are separated by 432 nucleotides16519 and 16520 are separated by 152 nucleotides mRNA_8148: 16516 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 527,058 to 528,382 16516 mRNA_8149: 16517 - KOG1198 Zinc-binding oxidoreductase, at 528,930 to 530,418 16517 mRNA_8150: 16518 - K11135 PINX1 Pin2-interacting protein X1, at 530,579 to 532,165 16518 mRNA_8151: 16519 - K19846 SPA2 protein SPA2, at 532,598 to 536,503 16519 mRNA_8152: 16520 - KOG2944 Glyoxalase, at 536,656 to 537,504 16520
Group Condition mRNA_8148 mRNA_8149 mRNA_8150 mRNA_8151 mRNA_8152
16516 16517 16518 16519 16520
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 -0.6 N.D. -0.9 -2.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.7 N.D. -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3 N.D. -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.8 N.D. +0.0 +0.5
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.2 N.D. +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.1 N.D. -0.2 -0.2
growth on ricinoleic acid YNB Glucose -1.0 +0.5 N.D. +0.6 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.4 N.D. +0.4 +0.0
growth on ypd YPD -0.3 +0.2 N.D. +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.8 -0.4 N.D. +0.3 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.2 N.D. +0.0 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.0 N.D. +1.3 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.0 N.D. +0.6 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.3 N.D. +0.3 +0.8
growth on oleic acid YNB Glucose +0.3 +0.6 N.D. +0.6 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.7 N.D. +1.2 +0.1
auxotrophy YNB Glucose +0.8 +0.1 N.D. +0.7 +0.1
auxotrophy YNB Glucose 75mM Methionine +1.2 +0.1 N.D. +0.7 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.6 N.D. +0.5 +1.1
auxotrophy Dropout Complete +0.9 +0.3 N.D. +0.6 +0.1
growth on oleic acid YNB Oleic Acid +0.9 +0.8 N.D. +0.7 +0.2
remove
mRNA_8148
plot
remove
mRNA_8149
plot
remove
mRNA_8150
remove
mRNA_8151
plot
remove
mRNA_8152
plot