Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16518 and 16519 are separated by 432 nucleotides16519 and 16520 are separated by 152 nucleotides16520 and 16521 are separated by 187 nucleotides16521 and 16522 are separated by 133 nucleotides mRNA_8150: 16518 - K11135 PINX1 Pin2-interacting protein X1, at 530,579 to 532,165 16518 mRNA_8151: 16519 - K19846 SPA2 protein SPA2, at 532,598 to 536,503 16519 mRNA_8152: 16520 - KOG2944 Glyoxalase, at 536,656 to 537,504 16520 mRNA_8153: 16521 - HMMPfam-Chalcone-flavanone isomerase-PF02431,SUPERFAMILY--SSF54626, at 537,692 to 539,063 16521 mRNA_8154: 16522 - HMMPfam-Ketopantoate reductase PanE/ApbA-PF02558,HMMPfam-Ketopantoate reductase PanE/ApbA C terminal-PF08546,SUPERFAMILY--SSF48179, at 539,197 to 540,895 16522
Group Condition mRNA_8150 mRNA_8151 mRNA_8152 mRNA_8153 mRNA_8154
16518 16519 16520 16521 16522
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.9 -2.0 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.2 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.1 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 -0.5 +0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 -0.1 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.4 +0.3 +0.1
growth on ricinoleic acid YNB Glucose N.D. +0.6 -0.1 -0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. +0.6 -0.3 -0.1 +0.1
growth on ypd YPD N.D. +0.1 +0.1 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 +0.3 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 +0.5 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.4 +0.0 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +1.3 -0.2 -0.3 -0.2
auxotrophy Dropout Complete N.D. +0.6 +0.1 +0.1 -0.1
auxotrophy YNB Glucose N.D. +0.7 +0.1 -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.7 -0.2 +0.1 +0.1
growth on oleic acid YNB Glucose N.D. +0.6 +0.0 +0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 +0.8 +0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.2 +0.1 -0.3 +0.0
growth on oleic acid YNB Oleic Acid N.D. +0.7 +0.2 +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.5 +1.1 +0.0 -0.2
remove
mRNA_8150
plot
remove
mRNA_8151
plot
remove
mRNA_8152
remove
mRNA_8153
plot
remove
mRNA_8154
plot