Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16523 and 16524 are separated by 600 nucleotides16524 and 16525 are separated by 887 nucleotides16525 and 16526 are separated by 192 nucleotides16526 and 16527 are separated by 185 nucleotides mRNA_8155: 16523 - K15361 WDR48, UAF1 WD repeat-containing protein 48, at 541,110 to 545,271 16523 mRNA_8156: 16524 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 545,872 to 548,769 16524 mRNA_8157: 16525 - ProSiteProfiles-DOMON domain profile.-PS50836,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344, at 549,657 to 551,853 16525 mRNA_8158: 16526 - K14004 SEC13 protein transport protein SEC13, at 552,046 to 553,498 16526 mRNA_8159: 16527 - K17607 TIPRL, TIP41 type 2A phosphatase activator TIP41, at 553,684 to 555,009 16527
Group Condition mRNA_8155 mRNA_8156 mRNA_8157 mRNA_8158 mRNA_8159
16523 16524 16525 16526 16527
facs on lipid accumulation Sorted Low BODIPY Gate +1.5 -2.2 -0.5 N.D. -1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -1.3 -0.2 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.8 -0.9 -0.0 N.D. +0.6
auxotrophy YNB Glucose -0.9 -1.3 -0.1 N.D. +1.2
auxotrophy YNB Glucose 75mM Arginine -0.7 -0.7 -0.1 N.D. +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -1.1 +0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -1.0 +0.0 N.D. +0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.4 +0.1 N.D. +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.7 +0.1 N.D. -0.1
growth on oleic acid YNB Glucose -0.4 -0.7 +0.0 N.D. +0.9
auxotrophy Dropout Complete -0.4 -0.8 -0.0 N.D. +1.1
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.3 +0.1 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.3 -0.2 N.D. -0.3
growth on ypd YPD -0.5 +0.0 +0.1 N.D. +0.5
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.3 -0.0 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.2 -0.0 N.D. -0.0
growth on oleic acid YNB Oleic Acid -0.6 -0.3 +0.0 N.D. +1.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.0 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.4 +0.1 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.1 +0.1 N.D. +1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +1.8 +0.2 N.D. +0.3
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