Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16534 and 16535 are separated by 168 nucleotides16535 and 16536 are separated by 1234 nucleotides16536 and 16537 are separated by 839 nucleotides16537 and 16538 are separated by 899 nucleotides mRNA_8166: 16534 - BLAST receptor-activated Ca2+-permeable cation channel [Aur..., at 571,164 to 574,503 16534 mRNA_8167: 16535 - K04350 RASGRP1 RAS guanyl-releasing protein 1, at 574,672 to 578,875 16535 mRNA_8168: 16536 - BLAST PQ-loop-domain-containing protein [Dichomitus squ..., at 580,110 to 581,600 16536 mRNA_8169: 16537 - HMMPfam-Anaphase-promoting complex, cyclosome, subunit 4-PF12896, at 582,440 to 584,866 16537 mRNA_8170: 16538 - BLAST PQ-loop-domain-containing protein [Calocera cornea HH..., at 585,766 to 587,530 16538
Group Condition mRNA_8166 mRNA_8167 mRNA_8168 mRNA_8169 mRNA_8170
16534 16535 16536 16537 16538
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.0 -0.3 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 +0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.0 +0.3 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 +0.2 N.D. +0.1
growth on oleic acid YNB Oleic Acid -0.0 +0.0 -0.0 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 -0.0 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 -0.0 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.1 +0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 +0.1 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 +0.2 N.D. +0.2
growth on oleic acid YNB Glucose +0.2 +0.0 +0.1 N.D. +0.0
auxotrophy YNB Glucose +0.1 +0.1 -0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 +0.0 N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.1 +0.2 -0.1 N.D. +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.2 -0.0 N.D. +0.5
auxotrophy Dropout Complete +0.4 +0.2 -0.1 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.2 +0.1 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.3 +0.1 N.D. +0.2
growth on ypd YPD +0.3 +0.1 +0.3 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.3 +0.1 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.2 +0.3 N.D. +0.2
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