Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16535 and 16536 are separated by 1234 nucleotides16536 and 16537 are separated by 839 nucleotides16537 and 16538 are separated by 899 nucleotides16538 and 16539 are separated by 125 nucleotides mRNA_8167: 16535 - K04350 RASGRP1 RAS guanyl-releasing protein 1, at 574,672 to 578,875 16535 mRNA_8168: 16536 - BLAST PQ-loop-domain-containing protein [Dichomitus squ..., at 580,110 to 581,600 16536 mRNA_8169: 16537 - HMMPfam-Anaphase-promoting complex, cyclosome, subunit 4-PF12896, at 582,440 to 584,866 16537 mRNA_8170: 16538 - BLAST PQ-loop-domain-containing protein [Calocera cornea HH..., at 585,766 to 587,530 16538 mRNA_8171: 16539 - HMMPfam-DnaJ domain-PF00226,ProSiteProfiles-dnaJ domain profile.-PS50076,SMART-DnaJ molecular chaperone homology domain-SM00271,SUPERFAMILY--SSF46565, at 587,656 to 589,364 16539
Group Condition mRNA_8167 mRNA_8168 mRNA_8169 mRNA_8170 mRNA_8171
16535 16536 16537 16538 16539
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 N.D. -0.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.3 N.D. +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 N.D. -0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.2 -0.1 N.D. +0.5 -0.7
growth on oleic acid YNB Glucose +0.0 +0.1 N.D. +0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 N.D. -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 N.D. +0.3 -0.2
auxotrophy YNB Glucose +0.1 -0.1 N.D. +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 N.D. -0.2 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.0 N.D. +0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.2 N.D. +0.1 +0.3
growth on oleic acid YNB Oleic Acid +0.0 -0.0 N.D. +0.0 +0.4
auxotrophy Dropout Complete +0.2 -0.1 N.D. +0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 N.D. +0.2 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.0 N.D. +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.1 N.D. +0.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.1 N.D. +0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.3 N.D. -0.4 +0.6
growth on ypd YPD +0.1 +0.3 N.D. +0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.3 N.D. +0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.1 N.D. -0.0 +0.8
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