Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16541 and 16542 are separated by 1358 nucleotides16542 and 16543 are separated by 281 nucleotides16543 and 16544 are separated by 295 nucleotides16544 and 16545 are separated by 261 nucleotides mRNA_8173: 16541 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 596,757 to 597,514 16541 mRNA_8174: 16542 - K00645 fabD [acyl-carrier-protein] S-malonyltransferase, at 598,873 to 600,672 16542 mRNA_8175: 16543 - K15303 AKR7 aflatoxin B1 aldehyde reductase, at 600,954 to 602,417 16543 mRNA_8176: 16544 - Interpro DNA replication regulator SLD3, at 602,713 to 604,782 16544 mRNA_8177: 16545 - Hypothetical Protein, at 605,044 to 605,937 16545
Group Condition mRNA_8173 mRNA_8174 mRNA_8175 mRNA_8176 mRNA_8177
16541 16542 16543 16544 16545
facs on lipid accumulation Sorted Low BODIPY Gate -2.0 -2.4 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -3.1 -0.3 N.D. N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 -0.9 N.D. N.D. -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -1.1 N.D. N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -1.3 N.D. N.D. -0.3
growth on ypd YPD -0.9 -0.7 N.D. N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.9 +0.7 N.D. N.D. -0.8
ypd buoyancy 40 hrs High Buoyancy -1.4 +0.9 N.D. N.D. -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.5 N.D. N.D. -0.6
growth on ricinoleic acid YNB Glucose -0.2 -0.4 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.3 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.2 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.6 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.1 N.D. N.D. +0.1
auxotrophy YNB Glucose -0.1 -0.4 N.D. N.D. +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.4 N.D. N.D. +0.4
growth on oleic acid YNB Oleic Acid +0.3 -0.2 N.D. N.D. -0.1
growth on oleic acid YNB Glucose +0.4 -0.6 N.D. N.D. +0.4
auxotrophy Dropout Complete +0.2 -0.0 N.D. N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.9 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.2 N.D. N.D. +0.4
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