Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16542 and 16543 are separated by 281 nucleotides16543 and 16544 are separated by 295 nucleotides16544 and 16545 are separated by 261 nucleotides16545 and 16546 are separated by 128 nucleotides mRNA_8174: 16542 - K00645 fabD [acyl-carrier-protein] S-malonyltransferase, at 598,873 to 600,672 16542 mRNA_8175: 16543 - K15303 AKR7 aflatoxin B1 aldehyde reductase, at 600,954 to 602,417 16543 mRNA_8176: 16544 - Interpro DNA replication regulator SLD3, at 602,713 to 604,782 16544 mRNA_8177: 16545 - Hypothetical Protein, at 605,044 to 605,937 16545 mRNA_8178: 16546 - Hypothetical Protein, at 606,066 to 607,018 16546
Group Condition mRNA_8174 mRNA_8175 mRNA_8176 mRNA_8177 mRNA_8178
16542 16543 16544 16545 16546
facs on lipid accumulation Sorted Low BODIPY Gate -2.4 N.D. N.D. -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 N.D. N.D. -0.5 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 N.D. N.D. -0.3 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 N.D. N.D. -0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.5 N.D. N.D. -0.6 -0.2
growth on oleic acid YNB Oleic Acid -0.2 N.D. N.D. -0.1 -0.9
growth on ricinoleic acid YNB Glucose -0.4 N.D. N.D. -0.0 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. N.D. +0.2 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. N.D. -0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.6 N.D. N.D. +0.3 -0.1
growth on oleic acid YNB Glucose -0.6 N.D. N.D. +0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.7 N.D. N.D. -0.8 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.9 N.D. N.D. -0.5 -0.2
auxotrophy YNB Glucose -0.4 N.D. N.D. +0.5 +0.2
growth on ypd YPD -0.7 N.D. N.D. +0.2 +0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. N.D. +0.4 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. N.D. +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. N.D. +0.2 +0.5
auxotrophy Dropout Complete -0.0 N.D. N.D. +0.3 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. N.D. +0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.9 N.D. N.D. -0.0 +0.2
remove
mRNA_8174
plot
remove
mRNA_8175
plot
remove
mRNA_8176
remove
mRNA_8177
plot
remove
mRNA_8178
plot