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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16548 and 16549 are separated by 87 nucleotides
16549 and 16550 are separated by 173 nucleotides
16550 and 16551 are separated by 9 nucleotides
16551 and 16552 are separated by 304 nucleotides
mRNA_8180: 16548 - K13127 RNF113A, CWC24 RING finger protein 113A, at 613,134 to 614,430
16548
mRNA_8181: 16549 - KOG1752 Glutaredoxin and related proteins, at 614,518 to 615,150
16549
mRNA_8182: 16550 - Hypothetical Protein, at 615,324 to 615,950
16550
mRNA_8183: 16551 - Hypothetical Protein, at 615,960 to 616,439
16551
mRNA_8184: 16552 - K00988 APA1_2 ATP adenylyltransferase, at 616,744 to 618,050
16552
Group
Condition
mRNA
_8180
mRNA
_8181
mRNA
_8182
mRNA
_8183
mRNA
_8184
16548
16549
16550
16551
16552
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.8
-0.3
N.D.
-0.3
growth on oleic acid
YNB Glucose
N.D.
-0.5
-0.4
N.D.
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.3
+0.2
N.D.
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.6
-0.1
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
-0.4
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.5
+0.0
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.7
-0.0
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.5
-0.4
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.4
+0.1
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.5
-0.0
N.D.
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.2
+0.1
N.D.
+0.2
auxotrophy
YNB Glucose
N.D.
-0.0
+0.2
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.0
+0.1
N.D.
+0.2
auxotrophy
Dropout Complete
N.D.
-0.1
+0.2
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.9
-0.4
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
-0.0
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
+0.3
N.D.
+0.0
growth on ypd
YPD
N.D.
+1.1
-0.2
N.D.
-0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.7
-0.2
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+1.5
-0.0
N.D.
+0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+1.5
+0.3
N.D.
-0.0
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