Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16549 and 16550 are separated by 173 nucleotides16550 and 16551 are separated by 9 nucleotides16551 and 16552 are separated by 304 nucleotides16552 and 16553 are separated by 759 nucleotides mRNA_8181: 16549 - KOG1752 Glutaredoxin and related proteins, at 614,518 to 615,150 16549 mRNA_8182: 16550 - Hypothetical Protein, at 615,324 to 615,950 16550 mRNA_8183: 16551 - Hypothetical Protein, at 615,960 to 616,439 16551 mRNA_8184: 16552 - K00988 APA1_2 ATP adenylyltransferase, at 616,744 to 618,050 16552 mRNA_8185: 16553 - K02359 EGH egghead protein (zeste-white 4 protein), at 618,810 to 622,514 16553
Group Condition mRNA_8181 mRNA_8182 mRNA_8183 mRNA_8184 mRNA_8185
16549 16550 16551 16552 16553
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.3 N.D. -0.3 N.D.
growth on oleic acid YNB Glucose -0.5 -0.4 N.D. +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.2 N.D. -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.1 N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.4 N.D. -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.0 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.0 N.D. +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.4 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.1 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.0 N.D. +0.6 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 N.D. +0.2 N.D.
auxotrophy YNB Glucose -0.0 +0.2 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 N.D. +0.2 N.D.
auxotrophy Dropout Complete -0.1 +0.2 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 -0.4 N.D. -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.0 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.3 N.D. +0.0 N.D.
growth on ypd YPD +1.1 -0.2 N.D. -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.7 -0.2 N.D. +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +1.5 -0.0 N.D. +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +1.5 +0.3 N.D. -0.0 N.D.
remove
mRNA_8181
plot		 remove
mRNA_8182
plot		 remove
mRNA_8183		 remove
mRNA_8184
plot		 remove
mRNA_8185
plot