Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16550 and 16551 are separated by 9 nucleotides16551 and 16552 are separated by 304 nucleotides16552 and 16553 are separated by 759 nucleotides16553 and 16554 are separated by 415 nucleotides mRNA_8182: 16550 - Hypothetical Protein, at 615,324 to 615,950 16550 mRNA_8183: 16551 - Hypothetical Protein, at 615,960 to 616,439 16551 mRNA_8184: 16552 - K00988 APA1_2 ATP adenylyltransferase, at 616,744 to 618,050 16552 mRNA_8185: 16553 - K02359 EGH egghead protein (zeste-white 4 protein), at 618,810 to 622,514 16553 mRNA_8186: 16554 - Hypothetical Protein, at 622,930 to 623,583 16554
Group Condition mRNA_8182 mRNA_8183 mRNA_8184 mRNA_8185 mRNA_8186
16550 16551 16552 16553 16554
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. -0.3 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.4 N.D. -0.2 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. +0.2 N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. -0.2 N.D. +0.2
growth on oleic acid YNB Glucose -0.4 N.D. +0.2 N.D. +0.1
growth on ypd YPD -0.2 N.D. -0.3 N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. +0.2 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.3 N.D. +0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. +0.6 N.D. -0.5
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. -0.0 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.4 N.D. +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. +0.3 N.D. -0.0
auxotrophy YNB Glucose +0.2 N.D. -0.1 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. +0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.2 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. +0.5 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.3 N.D. +0.0 N.D. +0.1
auxotrophy Dropout Complete +0.2 N.D. +0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.2 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. +0.2 N.D. +0.4
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