Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16551 and 16552 are separated by 304 nucleotides16552 and 16553 are separated by 759 nucleotides16553 and 16554 are separated by 415 nucleotides16554 and 16555 are separated by 841 nucleotides mRNA_8183: 16551 - Hypothetical Protein, at 615,960 to 616,439 16551 mRNA_8184: 16552 - K00988 APA1_2 ATP adenylyltransferase, at 616,744 to 618,050 16552 mRNA_8185: 16553 - K02359 EGH egghead protein (zeste-white 4 protein), at 618,810 to 622,514 16553 mRNA_8186: 16554 - Hypothetical Protein, at 622,930 to 623,583 16554 mRNA_8187: 16555 - K10949 KDELR ER lumen protein retaining receptor, at 624,425 to 625,437 16555
Group Condition mRNA_8183 mRNA_8184 mRNA_8185 mRNA_8186 mRNA_8187
16551 16552 16553 16554 16555
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 N.D. -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 N.D. -0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 N.D. -0.3 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.2 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 N.D. +0.2 N.D.
growth on ypd YPD N.D. -0.3 N.D. +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 N.D. +0.5 N.D.
auxotrophy YNB Glucose N.D. -0.1 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.6 N.D. -0.5 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.0 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 N.D. -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 N.D. +0.5 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 N.D. +0.1 N.D.
growth on oleic acid YNB Glucose N.D. +0.2 N.D. +0.1 N.D.
auxotrophy Dropout Complete N.D. +0.2 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.3 N.D. -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 N.D. +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.5 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 N.D. +0.4 N.D.
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