Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16552 and 16553 are separated by 759 nucleotides16553 and 16554 are separated by 415 nucleotides16554 and 16555 are separated by 841 nucleotides16555 and 16556 are separated by 285 nucleotides mRNA_8184: 16552 - K00988 APA1_2 ATP adenylyltransferase, at 616,744 to 618,050 16552 mRNA_8185: 16553 - K02359 EGH egghead protein (zeste-white 4 protein), at 618,810 to 622,514 16553 mRNA_8186: 16554 - Hypothetical Protein, at 622,930 to 623,583 16554 mRNA_8187: 16555 - K10949 KDELR ER lumen protein retaining receptor, at 624,425 to 625,437 16555 mRNA_8188: 16556 - K05012 CLCN3_4_5 chloride channel 3/4/5, at 625,723 to 629,622 16556
Group Condition mRNA_8184 mRNA_8185 mRNA_8186 mRNA_8187 mRNA_8188
16552 16553 16554 16555 16556
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. +0.5 N.D. -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. +0.5 N.D. -0.5
growth on oleic acid YNB Oleic Acid -0.2 N.D. +0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. -0.1 N.D. +0.4
growth on ypd YPD -0.3 N.D. +0.3 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. -0.3 N.D. +0.6
auxotrophy YNB Glucose -0.1 N.D. +0.2 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.2 N.D. +0.5
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. +0.2 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. -0.0 N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.5 N.D. +0.9
growth on oleic acid YNB Glucose +0.2 N.D. +0.1 N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. -0.0 N.D. +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.2 N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 N.D. -0.5 N.D. +0.6
auxotrophy Dropout Complete +0.2 N.D. +0.1 N.D. +0.6
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.1 N.D. +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.4 N.D. +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. -0.1 N.D. +0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. +0.3 N.D. +1.0
remove
mRNA_8184
plot
remove
mRNA_8185
plot
remove
mRNA_8186
remove
mRNA_8187
plot
remove
mRNA_8188
plot