Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16555 and 16556 are separated by 285 nucleotides16556 and 16557 are separated by 258 nucleotides16557 and 16558 are separated by 127 nucleotides16558 and 16559 are separated by 150 nucleotides mRNA_8187: 16555 - K10949 KDELR ER lumen protein retaining receptor, at 624,425 to 625,437 16555 mRNA_8188: 16556 - K05012 CLCN3_4_5 chloride channel 3/4/5, at 625,723 to 629,622 16556 mRNA_8189: 16557 - HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 629,881 to 631,255 16557 mRNA_8190: 16558 - KOG2757 Mannose-6-phosphate isomerase, at 631,383 to 634,543 16558 mRNA_8191: 16559 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 634,694 to 637,536 16559
Group Condition mRNA_8187 mRNA_8188 mRNA_8189 mRNA_8190 mRNA_8191
16555 16556 16557 16558 16559
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -1.0 -0.3 +0.1 +0.2
auxotrophy Dropout Complete N.D. +0.6 -0.5 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 -0.3 -0.6 +0.0
auxotrophy YNB Glucose N.D. +0.3 -0.3 +0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.3 -0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 -0.1 -0.1 -0.2
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.1 +0.2 -0.3
growth on oleic acid YNB Glucose N.D. +0.3 -0.1 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.6 -0.7 +0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.5 +0.6 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.4 +0.0 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.5 -0.2 -0.1 +0.2
growth on ypd YPD N.D. +0.2 +0.0 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.9 -0.2 +0.0 -0.4
growth on ricinoleic acid YNB Glucose N.D. +0.8 -0.6 +0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.3 +0.3 -0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.8 -0.3 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +1.0 -0.1 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.5 +0.4 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. +0.6 +0.7 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 +1.0 +0.1 +0.1
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