Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16557 and 16558 are separated by 127 nucleotides16558 and 16559 are separated by 150 nucleotides16559 and 16560 are separated by 258 nucleotides16560 and 16561 are separated by 202 nucleotides mRNA_8189: 16557 - HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 629,881 to 631,255 16557 mRNA_8190: 16558 - KOG2757 Mannose-6-phosphate isomerase, at 631,383 to 634,543 16558 mRNA_8191: 16559 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 634,694 to 637,536 16559 mRNA_8192: 16560 - K12780 REC8 meiotic recombination protein REC8, fungi type, at 637,795 to 641,120 16560 mRNA_8193: 16561 - Hypothetical Protein, at 641,323 to 644,118 16561
Group Condition mRNA_8189 mRNA_8190 mRNA_8191 mRNA_8192 mRNA_8193
16557 16558 16559 16560 16561
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.6 +0.0 +0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 +0.2 -0.0 -0.6
growth on oleic acid YNB Glucose -0.1 -0.1 -0.2 +0.1 -0.4
auxotrophy Dropout Complete -0.5 -0.5 -0.2 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 +0.2 +0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.2 -0.0 +0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.2 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.0 -0.4 +0.3 +0.2
auxotrophy YNB Glucose -0.3 +0.0 -0.4 +0.1 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.2 -0.1 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.2 +0.0 -0.1 +0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.2 -0.3 -0.0 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.1 +0.0 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.6 +0.1 +0.0 +0.1 +0.7
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.1 -0.0 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 -0.0 +0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.7 -0.1 -0.1 -0.2 +0.9
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.2 -0.1 +0.0 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 +0.2 +0.0 -0.2 +2.1
growth on ypd YPD +0.0 +0.1 -0.1 -0.0 +1.4
facs on lipid accumulation Sorted No BODIPY Gate +1.0 +0.1 +0.1 -0.1 +1.1
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