Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16560 and 16561 are separated by 202 nucleotides16561 and 16562 are separated by 285 nucleotides16562 and 16563 are separated by 487 nucleotides16563 and 16564 are separated by 110 nucleotides mRNA_8192: 16560 - K12780 REC8 meiotic recombination protein REC8, fungi type, at 637,795 to 641,120 16560 mRNA_8193: 16561 - Hypothetical Protein, at 641,323 to 644,118 16561 mRNA_8194: 16562 - K20794 NAA40, NAT4 N-alpha-acetyltransferase 40, at 644,404 to 645,092 16562 mRNA_8195: 16563 - Hypothetical Protein, at 645,580 to 648,404 16563 mRNA_8196: 16564 - K13501 TRP1 anthranilate synthase / indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase, at 648,515 to 650,860 16564
Group Condition mRNA_8192 mRNA_8193 mRNA_8194 mRNA_8195 mRNA_8196
16560 16561 16562 16563 16564
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.2 -1.7 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.3 -0.4 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.6 -0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.0 -0.5 -0.1 N.D.
growth on oleic acid YNB Glucose +0.1 -0.4 -0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.3 -0.2 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 +0.1 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 +0.3 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.5 -0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.0 +0.2 +0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.0 +0.4 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.6 +0.0 -0.1 N.D.
auxotrophy YNB Glucose +0.1 +0.4 +0.3 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.2 +0.0 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 +0.4 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.9 +0.4 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +1.1 +0.0 -0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.7 +0.2 +0.2 N.D.
growth on ypd YPD -0.0 +1.4 -0.2 +0.1 N.D.
auxotrophy Dropout Complete +0.1 +0.5 +0.6 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +2.1 -0.4 +0.2 N.D.
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