Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16563 and 16564 are separated by 110 nucleotides16564 and 16565 are separated by 1377 nucleotides16565 and 16566 are separated by 226 nucleotides16566 and 16567 are separated by 101 nucleotides mRNA_8195: 16563 - Hypothetical Protein, at 645,580 to 648,404 16563 mRNA_8196: 16564 - K13501 TRP1 anthranilate synthase / indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase, at 648,515 to 650,860 16564 mRNA_8197: 16565 - KOG2922 Uncharacterized conserved protein, at 652,238 to 654,491 16565 mRNA_8198: 16566 - K03190 ureD, ureH urease accessory protein, at 654,718 to 655,775 16566 mRNA_8199: 16567 - Hypothetical Protein, at 655,877 to 657,716 16567
Group Condition mRNA_8195 mRNA_8196 mRNA_8197 mRNA_8198 mRNA_8199
16563 16564 16565 16566 16567
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. +0.1 -0.1 -2.4
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.4 +0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.0 -0.1 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.8 -0.1 -1.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.3 -0.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. +0.2 -0.2 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. +0.3 -0.4 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -0.2 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. +0.0 +0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. -0.4 +0.8 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.5 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.7 -0.3 -0.2
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.1 -0.4 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. +0.5 +0.2 -0.2
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.1 +0.6 +0.0
auxotrophy YNB Glucose -0.3 N.D. +0.3 -0.3 +1.1
growth on oleic acid YNB Glucose +0.1 N.D. +0.2 -0.5 +1.2
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. +0.2 -0.4 +1.2
growth on ypd YPD +0.1 N.D. +0.2 +0.4 +0.4
auxotrophy Dropout Complete +0.1 N.D. +0.3 -0.3 +1.1
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.2 -0.1 +1.2
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