Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16564 and 16565 are separated by 1377 nucleotides16565 and 16566 are separated by 226 nucleotides16566 and 16567 are separated by 101 nucleotides16567 and 16568 are separated by 466 nucleotides mRNA_8196: 16564 - K13501 TRP1 anthranilate synthase / indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase, at 648,515 to 650,860 16564 mRNA_8197: 16565 - KOG2922 Uncharacterized conserved protein, at 652,238 to 654,491 16565 mRNA_8198: 16566 - K03190 ureD, ureH urease accessory protein, at 654,718 to 655,775 16566 mRNA_8199: 16567 - Hypothetical Protein, at 655,877 to 657,716 16567 mRNA_8200: 16568 - KOG4635 Vacuolar import and degradation protein, at 658,183 to 660,127 16568
Group Condition mRNA_8196 mRNA_8197 mRNA_8198 mRNA_8199 mRNA_8200
16564 16565 16566 16567 16568
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 -0.1 -2.4 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. -0.4 +0.1 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.8 -0.1 -1.5 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 -0.0 -0.5 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 -0.1 -0.8 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.2 -0.6 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 -0.4 -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 +0.0 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 +0.1 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.7 -0.3 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 +0.8 -0.4 +0.1
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.4 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 +0.1 -0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.5 +0.2 -0.2 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.1 +0.6 +0.0 +0.1
growth on oleic acid YNB Glucose N.D. +0.2 -0.5 +1.2 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 -0.4 +1.2 +0.0
growth on ypd YPD N.D. +0.2 +0.4 +0.4 +0.0
auxotrophy YNB Glucose N.D. +0.3 -0.3 +1.1 +0.1
auxotrophy Dropout Complete N.D. +0.3 -0.3 +1.1 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.1 +1.2 +0.1
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