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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16570 and 16571 are separated by 441 nucleotides
16571 and 16572 are separated by 710 nucleotides
16572 and 16573 are separated by 238 nucleotides
16573 and 16574 are separated by 491 nucleotides
mRNA_8202: 16570 - K03283 HSPA1_8 heat shock 70kDa protein 1/8, at 661,821 to 664,157
16570
mRNA_8203: 16571 - KOG3289 Uncharacterized conserved protein encoded by sequence overlapping the COX4 gene, at 664,599 to 665,368
16571
mRNA_8204: 16572 - KOG3289 Uncharacterized conserved protein encoded by sequence overlapping the COX4 gene, at 666,079 to 666,849
16572
mRNA_8205: 16573 - K11339 MORF4L1, MRG15, EAF3 mortality factor 4-like protein 1, at 667,088 to 668,435
16573
mRNA_8206: 16574 - Hypothetical Protein, at 668,927 to 671,971
16574
Group
Condition
mRNA
_8202
mRNA
_8203
mRNA
_8204
mRNA
_8205
mRNA
_8206
16570
16571
16572
16573
16574
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
-1.8
-2.9
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
-1.6
-2.8
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
-0.8
-2.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
-0.9
-0.8
-0.8
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.8
-0.7
-0.8
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-1.6
+0.9
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.0
-2.3
+1.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
-0.9
+0.9
-0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
-0.7
+0.4
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.3
-1.6
+1.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
+0.1
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
-0.8
+0.9
+0.3
growth on oleic acid
YNB Oleic Acid
N.D.
-0.5
-0.2
+0.9
+0.1
growth on ypd
YPD
N.D.
+0.2
+1.3
-1.2
+0.0
auxotrophy
Dropout Complete
N.D.
+0.1
-0.4
+0.4
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
-0.0
+0.4
+0.0
auxotrophy
YNB Glucose
N.D.
-0.1
-0.7
+0.9
+0.5
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
+0.5
-0.0
-0.1
growth on oleic acid
YNB Glucose
N.D.
-0.3
-0.3
+0.8
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
-0.8
+1.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
-0.2
+1.6
+0.2
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