Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16576 and 16577 are separated by 245 nucleotides16577 and 16578 are separated by 196 nucleotides16578 and 16579 are separated by 1382 nucleotides16579 and 16580 are separated by 205 nucleotides mRNA_8208: 16576 - BLAST putative Rho guanyl-nucleotide exchange factor [Rhodo..., at 672,999 to 674,159 16576 mRNA_8209: 16577 - K17618 UBLCP1 ubiquitin-like domain-containing CTD phosphatase 1, at 674,405 to 676,070 16577 mRNA_8210: 16578 - BLAST WetA [Penicillium camemberti], at 676,267 to 678,027 16578 mRNA_8211: 16579 - K02894 RP-L23e, RPL23 large subunit ribosomal protein L23e, at 679,410 to 680,572 16579 mRNA_8212: 16580 - K17878 NNT1 nicotinamide N-methyltransferase, at 680,778 to 681,996 16580
Group Condition mRNA_8208 mRNA_8209 mRNA_8210 mRNA_8211 mRNA_8212
16576 16577 16578 16579 16580
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -2.4 +0.2 N.D. +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.6 -0.2 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 +0.0 N.D. -0.3
growth on oleic acid YNB Glucose N.D. -0.0 +0.2 N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 +0.3 N.D. -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.0 +0.1 N.D. -0.2
growth on ypd YPD N.D. +0.5 +0.1 N.D. -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 +0.5 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 +0.1 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 +0.1 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 +0.4 N.D. -0.0
growth on ricinoleic acid YNB Glucose N.D. +0.4 -0.1 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.0 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 +0.1 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.3 N.D. +0.5
auxotrophy Dropout Complete N.D. +0.6 +0.2 N.D. -0.3
auxotrophy YNB Glucose N.D. +0.4 +0.4 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.5 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 +0.5 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 +0.6 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.4 +0.7 N.D. -0.2
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