Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16579 and 16580 are separated by 205 nucleotides16580 and 16581 are separated by 137 nucleotides16581 and 16582 are separated by 225 nucleotides16582 and 16583 are separated by 481 nucleotides mRNA_8211: 16579 - K02894 RP-L23e, RPL23 large subunit ribosomal protein L23e, at 679,410 to 680,572 16579 mRNA_8212: 16580 - K17878 NNT1 nicotinamide N-methyltransferase, at 680,778 to 681,996 16580 mRNA_8213: 16581 - KOG1590 Uncharacterized conserved protein, at 682,134 to 683,094 16581 mRNA_8214: 16582 - BLAST NADH-ubiquinone oxidoreductase 9.5 kDa subunit [R..., at 683,320 to 684,168 16582 mRNA_8215: 16583 - ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785, at 684,650 to 685,960 16583
Group Condition mRNA_8211 mRNA_8212 mRNA_8213 mRNA_8214 mRNA_8215
16579 16580 16581 16582 16583
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.5 +1.5 -3.9 -1.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -2.2 -0.6 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.5 -1.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 -1.9 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 -1.4 -0.8 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 -2.5 +0.7 -0.0
growth on oleic acid YNB Glucose N.D. -0.5 -0.5 -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 -1.9 +0.1 +0.3
auxotrophy Dropout Complete N.D. -0.3 +0.3 -0.5 -0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.9 -0.2 +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.6 +0.1 -0.4
auxotrophy YNB Glucose N.D. -0.2 +0.7 -0.5 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 -1.3 +1.1 +0.1
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.8 +0.7 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 +1.5 -1.2 -0.1
growth on ypd YPD N.D. -0.7 +0.5 +0.5 -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.3 -0.1 +0.4
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.3 +0.6 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.5 +0.5 +0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 +0.5 -0.1 +0.6
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 +1.2 -0.2 -0.5
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