Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16582 and 16583 are separated by 481 nucleotides16583 and 16584 are separated by 331 nucleotides16584 and 16585 are separated by 696 nucleotides16585 and 16586 are separated by 1765 nucleotides mRNA_8214: 16582 - BLAST NADH-ubiquinone oxidoreductase 9.5 kDa subunit [R..., at 683,320 to 684,168 16582 mRNA_8215: 16583 - ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785, at 684,650 to 685,960 16583 mRNA_8216: 16584 - K14376 PAP poly(A) polymerase, at 686,292 to 689,011 16584 mRNA_8217: 16585 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 689,708 to 696,121 16585 mRNA_8218: 16586 - K02905 RP-L29e, RPL29 large subunit ribosomal protein L29e, at 697,887 to 698,253 16586
Group Condition mRNA_8214 mRNA_8215 mRNA_8216 mRNA_8217 mRNA_8218
16582 16583 16584 16585 16586
ypd buoyancy 40 hrs No Buoyancy Separation -3.9 -1.5 +0.2 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -0.1 -1.7 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.5 -0.2 -1.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 +0.3 -1.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -1.0 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 -1.6 +0.1 N.D.
auxotrophy Dropout Complete -0.5 -0.5 +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.4 -0.7 +0.0 N.D.
auxotrophy YNB Glucose -0.5 -0.2 +0.0 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 -0.0 -0.9 -0.6 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.5 +0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.6 -0.6 -0.1 N.D.
growth on ypd YPD +0.5 -0.0 -0.8 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.4 +0.4 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.3 -0.6 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.4 +0.6 -0.1 N.D.
growth on oleic acid YNB Glucose -0.2 -0.0 +0.5 -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.6 -0.2 +0.1 -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.7 +0.0 -0.0 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +1.1 +0.1 -0.1 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.4 +1.2 -0.0 N.D.
remove
mRNA_8214
plot
remove
mRNA_8215
plot
remove
mRNA_8216
remove
mRNA_8217
plot
remove
mRNA_8218
plot