Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16584 and 16585 are separated by 696 nucleotides16585 and 16586 are separated by 1765 nucleotides16586 and 16587 are separated by 297 nucleotides16587 and 16588 are separated by 228 nucleotides mRNA_8216: 16584 - K14376 PAP poly(A) polymerase, at 686,292 to 689,011 16584 mRNA_8217: 16585 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 689,708 to 696,121 16585 mRNA_8218: 16586 - K02905 RP-L29e, RPL29 large subunit ribosomal protein L29e, at 697,887 to 698,253 16586 mRNA_8219: 16587 - K15202 GTF3C5, TFC1 general transcription factor 3C polypeptide 5 (transcription factor C subunit 1), at 698,551 to 700,808 16587 mRNA_8220: 16588 - KOG3894 SNARE protein Syntaxin 18/UFE1, at 701,037 to 702,340 16588
Group Condition mRNA_8216 mRNA_8217 mRNA_8218 mRNA_8219 mRNA_8220
16584 16585 16586 16587 16588
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.0 +0.0 N.D. -0.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 +0.0 N.D. -0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.7 +0.3 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 -0.0 N.D. -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.6 +0.1 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.6 N.D. +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.1 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.0 N.D. -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.2 N.D. -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 N.D. -0.7 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.2 N.D. -0.4 N.D.
auxotrophy YNB Glucose +0.0 -0.2 N.D. -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.3 N.D. +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.6 -0.1 N.D. -0.5 N.D.
growth on ricinoleic acid YNB Glucose -0.0 -0.1 N.D. +0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.2 N.D. +0.3 N.D.
auxotrophy Dropout Complete +0.1 -0.1 N.D. +0.4 N.D.
growth on oleic acid YNB Glucose +0.5 -0.1 N.D. +0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine +1.2 -0.0 N.D. -0.2 N.D.
growth on ypd YPD -0.8 +0.2 N.D. +1.8 N.D.
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