Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16585 and 16586 are separated by 1765 nucleotides16586 and 16587 are separated by 297 nucleotides16587 and 16588 are separated by 228 nucleotides16588 and 16589 are separated by 100 nucleotides mRNA_8217: 16585 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 689,708 to 696,121 16585 mRNA_8218: 16586 - K02905 RP-L29e, RPL29 large subunit ribosomal protein L29e, at 697,887 to 698,253 16586 mRNA_8219: 16587 - K15202 GTF3C5, TFC1 general transcription factor 3C polypeptide 5 (transcription factor C subunit 1), at 698,551 to 700,808 16587 mRNA_8220: 16588 - KOG3894 SNARE protein Syntaxin 18/UFE1, at 701,037 to 702,340 16588 mRNA_8221: 16589 - KOG3140 Predicted membrane protein, at 702,441 to 703,886 16589
Group Condition mRNA_8217 mRNA_8218 mRNA_8219 mRNA_8220 mRNA_8221
16585 16586 16587 16588 16589
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. -0.2 N.D. -1.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.4 N.D. -0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.3 N.D. -0.7
auxotrophy YNB Glucose -0.2 N.D. -0.0 N.D. -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 N.D. -0.7 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. -0.4 N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.2 N.D. +0.3 N.D. -0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.4 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. -0.7 N.D. +0.6
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.5 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. -0.7 N.D. +0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.1 N.D. +0.1
growth on oleic acid YNB Glucose -0.1 N.D. +0.6 N.D. -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.1 N.D. -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. +0.4 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 N.D. +0.4 N.D. +0.3
auxotrophy Dropout Complete -0.1 N.D. +0.4 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. -0.1 N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.3 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. +0.1 N.D. -0.1
growth on ypd YPD +0.2 N.D. +1.8 N.D. +0.5
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