Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16590 and 16591 are separated by 326 nucleotides16591 and 16592 are separated by 719 nucleotides16592 and 16593 are separated by 265 nucleotides16593 and 16594 are separated by 1101 nucleotides mRNA_8222: 16590 - KOG3140 Predicted membrane protein, at 704,261 to 706,813 16590 mRNA_8223: 16591 - K00801 FDFT1 farnesyl-diphosphate farnesyltransferase, at 707,140 to 708,844 16591 mRNA_8224: 16592 - K00948 PRPS, prsA ribose-phosphate pyrophosphokinase, at 709,564 to 711,429 16592 mRNA_8225: 16593 - HMMPfam-DSBA-like thioredoxin domain-PF01323,SUPERFAMILY--SSF52833, at 711,695 to 712,857 16593 mRNA_8226: 16594 - KOG0849 Transcription factor PRD and related proteins, contain PAX and HOX domains, at 713,959 to 715,025 16594
Group Condition mRNA_8222 mRNA_8223 mRNA_8224 mRNA_8225 mRNA_8226
16590 16591 16592 16593 16594
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. N.D. -0.8 -2.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. N.D. -0.5 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. N.D. -0.5 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 N.D. N.D. -0.7 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. N.D. -0.5 +0.1
auxotrophy YNB Glucose +0.1 N.D. N.D. +0.2 -0.6
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. N.D. -0.0 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. N.D. -0.3 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. N.D. +0.2 -0.4
auxotrophy Dropout Complete +0.2 N.D. N.D. +0.2 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. N.D. -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. N.D. -0.0 -0.0
growth on ypd YPD -0.1 N.D. N.D. +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. N.D. -0.1 +0.4
growth on oleic acid YNB Glucose +0.3 N.D. N.D. +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. N.D. +0.5 -0.0
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. -0.1 +0.7
growth on ricinoleic acid YNB Glucose -0.1 N.D. N.D. +0.3 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. N.D. +0.1 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. N.D. +0.5 +1.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. N.D. +0.9 +1.0
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