Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16595 and 16596 are separated by 2 nucleotides16596 and 16597 are separated by 567 nucleotides16597 and 16598 are separated by 916 nucleotides16598 and 16599 are separated by 505 nucleotides mRNA_8227: 16595 - BLAST Post-SET domain protein [Cordyceps confragosa RCEF 1005], at 715,339 to 716,197 16595 mRNA_8228: 16596 - K11648 SMARCB1, SNF5, INI1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, at 716,200 to 719,512 16596 mRNA_8229: 16597 - K04630 GNAI guanine nucleotide-binding protein G(i) subunit alpha, at 720,080 to 721,710 16597 mRNA_8230: 16598 - K09668 LARGE glycosyltransferase-like protein LARGE, at 722,627 to 724,673 16598 mRNA_8231: 16599 - KOG0927 Predicted transporter (ABC superfamily), at 725,179 to 727,142 16599
Group Condition mRNA_8227 mRNA_8228 mRNA_8229 mRNA_8230 mRNA_8231
16595 16596 16597 16598 16599
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.1 -0.2 -1.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -1.2 +0.1 -0.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.5 -0.1 -0.4 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.7 -0.1 +0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.1 -0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.1 -0.3 -0.7 +0.5
auxotrophy YNB Glucose -0.3 -0.3 -0.2 +0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 +0.0 -0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 -0.2 +0.4 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.5 -0.2 +0.4 +0.3
growth on ypd YPD +0.0 -0.2 -0.0 +0.1 +0.2
growth on oleic acid YNB Glucose +0.0 -0.4 -0.1 +0.7 +0.1
auxotrophy Dropout Complete -0.2 -0.3 -0.1 +0.9 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.7 -0.0 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.7 +0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.1 -0.1 +1.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 -0.1 +1.3 -0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.3 -0.4 +2.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.8 +0.1 +3.0 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +1.1 -0.1 +1.4 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.7 -0.2 +3.1 -0.0
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