Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16596 and 16597 are separated by 567 nucleotides16597 and 16598 are separated by 916 nucleotides16598 and 16599 are separated by 505 nucleotides16599 and 16600 are separated by 162 nucleotides mRNA_8228: 16596 - K11648 SMARCB1, SNF5, INI1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, at 716,200 to 719,512 16596 mRNA_8229: 16597 - K04630 GNAI guanine nucleotide-binding protein G(i) subunit alpha, at 720,080 to 721,710 16597 mRNA_8230: 16598 - K09668 LARGE glycosyltransferase-like protein LARGE, at 722,627 to 724,673 16598 mRNA_8231: 16599 - KOG0927 Predicted transporter (ABC superfamily), at 725,179 to 727,142 16599 mRNA_8232: 16600 - K12623 LSM4 U6 snRNA-associated Sm-like protein LSm4, at 727,305 to 728,231 16600
Group Condition mRNA_8228 mRNA_8229 mRNA_8230 mRNA_8231 mRNA_8232
16596 16597 16598 16599 16600
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.2 -1.2 -0.0 -0.9
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.1 -0.4 +0.2 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.3 -0.7 +0.5 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.2 +0.1 -0.4 -0.0 +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.3 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.1 +0.0 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.0 -0.3 +0.0 -0.3
auxotrophy YNB Glucose -0.3 -0.2 +0.3 -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.2 +0.4 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.2 +0.4 +0.3 +0.3
auxotrophy Dropout Complete -0.3 -0.1 +0.9 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.0 +0.2 -0.4 +0.0
growth on ypd YPD -0.2 -0.0 +0.1 +0.2 +0.7
growth on ricinoleic acid YNB Glucose +0.1 -0.1 +1.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.1 -0.1 -0.1 +0.1
growth on oleic acid YNB Glucose -0.4 -0.1 +0.7 +0.1 +0.6
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 +1.3 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.3 -0.4 +2.1 -0.1 +0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 +0.1 +3.0 -0.4 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.1 -0.1 +1.4 +0.0 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 -0.2 +3.1 -0.0 +1.0
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