Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16601 and 16602 are separated by 225 nucleotides16602 and 16603 are separated by 417 nucleotides16603 and 16604 are separated by 169 nucleotides16604 and 16605 are separated by 393 nucleotides mRNA_8233: 16601 - K13113 UBL5, HUB1 ubiquitin-like protein 5, at 728,437 to 729,216 16601 mRNA_8234: 16602 - KOG3702 Nuclear polyadenylated RNA binding protein, at 729,442 to 731,463 16602 mRNA_8235: 16603 - Hypothetical Protein, at 731,881 to 732,842 16603 mRNA_8236: 16604 - Interpro Fungal protein of unknown function (DUF1770) 0, at 733,012 to 733,833 16604 mRNA_8237: 16605 - K04345 PKA protein kinase A, at 734,227 to 736,264 16605
Group Condition mRNA_8233 mRNA_8234 mRNA_8235 mRNA_8236 mRNA_8237
16601 16602 16603 16604 16605
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.3 +0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.3 -0.3 +0.1
growth on ypd YPD N.D. N.D. -0.7 +0.4 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.6 -0.4 -0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.2 +0.3 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.3 +0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.3 -0.1 +0.7
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.2 +0.2 +0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.1 +0.4 -0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.1 -0.0 +0.4
growth on oleic acid YNB Glucose N.D. N.D. +0.2 -0.2 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.3 +0.4 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.4 +0.1 +0.1
auxotrophy YNB Glucose N.D. N.D. +0.0 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.6 +0.5 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.3 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.1 +0.3 +0.7
auxotrophy Dropout Complete N.D. N.D. +0.0 +0.6 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.2 -0.1 +1.2
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.3 +0.0 +1.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.3 -0.2 +1.3
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