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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16607 and 16608 are separated by 300 nucleotides
16608 and 16609 are separated by 179 nucleotides
16609 and 16610 are separated by 299 nucleotides
16610 and 16611 are separated by 400 nucleotides
mRNA_8239: 16607 - K00101 E1.1.2.3, lldD L-lactate dehydrogenase (cytochrome), at 738,207 to 740,675
16607
mRNA_8240: 16608 - K14350 AADACL2 arylacetamide deacetylase-like 2, at 740,976 to 744,696
16608
mRNA_8241: 16609 - Hypothetical Protein, at 744,876 to 746,640
16609
mRNA_8242: 16610 - KOG3319 Predicted membrane protein, at 746,940 to 748,080
16610
mRNA_8243: 16611 - K08739 MLH3 DNA mismatch repair protein MLH3, at 748,481 to 751,637
16611
Group
Condition
mRNA
_8239
mRNA
_8240
mRNA
_8241
mRNA
_8242
mRNA
_8243
16607
16608
16609
16610
16611
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.2
-0.0
-1.9
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.4
-0.4
-0.9
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.1
+0.1
-1.3
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
+0.0
-0.0
+0.3
-0.2
growth on oleic acid
YNB Glucose
+0.0
+0.4
-0.4
-0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.4
-0.2
-0.6
+0.2
growth on oleic acid
YNB Oleic Acid
+0.1
+0.4
-0.6
+0.4
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.5
-0.1
-0.5
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.2
+0.3
+0.0
+0.0
growth on ypd
YPD
-0.6
+0.1
-0.3
+0.7
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.2
+0.0
+0.7
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.2
-0.3
+1.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.5
+0.5
+0.1
+0.1
growth on ricinoleic acid
YNB Glucose
+0.0
+0.3
+0.2
+0.2
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
+0.1
+0.5
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.1
+0.2
+0.8
-0.1
auxotrophy
YNB Glucose
-0.3
+0.2
+0.3
+1.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.2
+0.2
+1.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.3
+0.1
+1.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.2
+0.2
+1.4
+0.3
auxotrophy
Dropout Complete
-0.0
+0.2
+0.8
+0.7
+0.4
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