Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16611 and 16612 are separated by 167 nucleotides16612 and 16613 are separated by 293 nucleotides16613 and 16614 are separated by 355 nucleotides16614 and 16615 are separated by 325 nucleotides mRNA_8243: 16611 - K08739 MLH3 DNA mismatch repair protein MLH3, at 748,481 to 751,637 16611 mRNA_8244: 16612 - K14786 KRI1 protein KRI1, at 751,805 to 754,209 16612 mRNA_8245: 16613 - HMMPfam-Mitochondrial carrier protein-PF00153,ProSiteProfiles-Solute carrier (Solcar) repeat profile.-PS50920,SUPERFAMILY--SSF103506, at 754,503 to 755,818 16613 mRNA_8246: 16614 - Hypothetical Protein, at 756,174 to 757,457 16614 mRNA_8247: 16615 - K01426 E3.5.1.4, amiE amidase, at 757,783 to 759,749 16615
Group Condition mRNA_8243 mRNA_8244 mRNA_8245 mRNA_8246 mRNA_8247
16611 16612 16613 16614 16615
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -1.4 -3.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. +0.1 -0.7 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. -1.0 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -1.7 +0.3 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. +0.3 -0.8 -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -0.4 -0.4 -0.4
growth on ricinoleic acid YNB Glucose +0.3 N.D. -0.2 -1.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.0 -0.5 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. -0.1 -1.1 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.4 N.D. +0.4 -0.5 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -0.6 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. +0.0 -0.3 +0.3
growth on ypd YPD +0.3 N.D. +0.1 -0.5 +0.2
growth on oleic acid YNB Glucose -0.3 N.D. +0.2 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. -0.3 +0.6 -0.1
growth on oleic acid YNB Oleic Acid -0.4 N.D. -0.1 +0.8 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. -0.8 +1.1 +0.5
auxotrophy Dropout Complete +0.4 N.D. +0.5 +0.9 -0.8
auxotrophy YNB Glucose -0.0 N.D. +0.0 +1.7 -0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.9 +1.0 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. +0.8 +1.7 +0.4
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