Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16616 and 16617 are separated by 457 nucleotides16617 and 16618 are separated by 127 nucleotides16618 and 16619 are separated by 652 nucleotides16619 and 16620 are separated by 569 nucleotides mRNA_8248: 16616 - KOG2945 Predicted RNA-binding protein, at 760,832 to 762,310 16616 mRNA_8249: 16617 - SUPERFAMILY--SSF52047, at 762,768 to 764,331 16617 mRNA_8250: 16618 - K17069 MET17 O-acetylhomoserine/O-acetylserine sulfhydrylase, at 764,459 to 766,227 16618 mRNA_8251: 16619 - HMMPfam-SacI homology domain-PF02383,ProSiteProfiles-Sac phosphatase domain profile.-PS50275, at 766,880 to 770,400 16619 mRNA_8252: 16620 - HMMPfam-Domain of unknown function (DUF4451)-PF14616, at 770,970 to 773,846 16620
Group Condition mRNA_8248 mRNA_8249 mRNA_8250 mRNA_8251 mRNA_8252
16616 16617 16618 16619 16620
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.6 -0.3 -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -2.1 -0.3 +0.3 +0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.4 +0.0 +0.4 -0.6 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.4 -0.3 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 -0.1 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 -0.1 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3 +0.3 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.1 +0.4 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.2 +0.4 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.4 +0.2 +0.1 N.D.
growth on ypd YPD +0.0 -0.3 +0.1 +0.3 N.D.
growth on oleic acid YNB Glucose -0.2 +0.0 +0.2 +0.1 N.D.
auxotrophy Dropout Complete +0.0 -0.2 +0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 +0.0 -0.2 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.4 +0.4 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.0 +0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.0 -0.2 +0.3 N.D.
auxotrophy YNB Glucose +0.2 -0.0 +0.2 +0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.4 -0.0 +0.4 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 +0.0 -0.2 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.1 +0.0 -0.3 +0.3 N.D.
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