Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16618 and 16619 are separated by 652 nucleotides
16619 and 16620 are separated by 569 nucleotides
16620 and 16621 are separated by 705 nucleotides
16621 and 16622 are separated by 383 nucleotides
mRNA_8250: 16618 - K17069 MET17 O-acetylhomoserine/O-acetylserine sulfhydrylase, at 764,459 to 766,227
16618
mRNA_8251: 16619 - HMMPfam-SacI homology domain-PF02383,ProSiteProfiles-Sac phosphatase domain profile.-PS50275, at 766,880 to 770,400
16619
mRNA_8252: 16620 - HMMPfam-Domain of unknown function (DUF4451)-PF14616, at 770,970 to 773,846
16620
mRNA_8253: 16621 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 774,552 to 775,844
16621
mRNA_8254: 16622 - HMMPfam-Stc1 domain-PF12898, at 776,228 to 777,333
16622
Group
Condition
mRNA
_8250
mRNA
_8251
mRNA
_8252
mRNA
_8253
mRNA
_8254
16618
16619
16620
16621
16622
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
-0.6
N.D.
-0.7
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.4
N.D.
-1.2
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.4
N.D.
+0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.1
N.D.
-0.6
+0.1
auxotrophy
YNB Glucose
+0.2
+0.2
N.D.
-0.7
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.3
N.D.
-0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
N.D.
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.3
N.D.
-0.4
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.3
N.D.
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.1
N.D.
-0.3
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
N.D.
-0.1
+0.0
growth on ricinoleic acid
YNB Glucose
+0.4
-0.1
N.D.
-0.6
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.1
N.D.
+0.4
-0.1
auxotrophy
Dropout Complete
+0.2
+0.2
N.D.
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.3
N.D.
+0.5
-0.1
growth on oleic acid
YNB Glucose
+0.2
+0.1
N.D.
+0.4
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.0
N.D.
+0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.2
N.D.
+0.3
-0.1
growth on ypd
YPD
+0.1
+0.3
N.D.
+0.4
+0.2
growth on oleic acid
YNB Oleic Acid
+0.2
+0.2
N.D.
+0.5
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
+0.2
N.D.
+0.2
+0.2
remove
mRNA_8250
plot
remove
mRNA_8251
plot
remove
mRNA_8252
remove
mRNA_8253
plot
remove
mRNA_8254
plot