Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16619 and 16620 are separated by 569 nucleotides16620 and 16621 are separated by 705 nucleotides16621 and 16622 are separated by 383 nucleotides16622 and 16623 are separated by 353 nucleotides mRNA_8251: 16619 - HMMPfam-SacI homology domain-PF02383,ProSiteProfiles-Sac phosphatase domain profile.-PS50275, at 766,880 to 770,400 16619 mRNA_8252: 16620 - HMMPfam-Domain of unknown function (DUF4451)-PF14616, at 770,970 to 773,846 16620 mRNA_8253: 16621 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 774,552 to 775,844 16621 mRNA_8254: 16622 - HMMPfam-Stc1 domain-PF12898, at 776,228 to 777,333 16622 mRNA_8255: 16623 - K01792 E5.1.3.15 glucose-6-phosphate 1-epimerase, at 777,687 to 778,914 16623
Group Condition mRNA_8251 mRNA_8252 mRNA_8253 mRNA_8254 mRNA_8255
16619 16620 16621 16622 16623
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.6 +0.1 -0.4
auxotrophy YNB Glucose +0.2 N.D. -0.7 -0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.6 N.D. -0.7 -0.0 +0.5
growth on ypd YPD +0.3 N.D. +0.4 +0.2 -1.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.4 -0.1 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. -0.4 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. -0.1 -0.0 -0.4
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.6 +0.3 +0.1
auxotrophy Dropout Complete +0.2 N.D. -0.2 +0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.3 +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. +0.3 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. +0.5 -0.1 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 N.D. -1.2 +0.1 +0.8
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. -0.2 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. -0.1 +0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. -0.2 +0.0 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. +0.3 -0.1 -0.0
growth on oleic acid YNB Glucose +0.1 N.D. +0.4 -0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. +0.3 -0.0 +0.3
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.5 +0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. +0.2 +0.2 +0.7
remove
mRNA_8251
plot
remove
mRNA_8252
plot
remove
mRNA_8253
remove
mRNA_8254
plot
remove
mRNA_8255
plot