Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16622 and 16623 are separated by 353 nucleotides16623 and 16624 are separated by 677 nucleotides16624 and 16625 are separated by 249 nucleotides16625 and 16626 are separated by 571 nucleotides mRNA_8254: 16622 - HMMPfam-Stc1 domain-PF12898, at 776,228 to 777,333 16622 mRNA_8255: 16623 - K01792 E5.1.3.15 glucose-6-phosphate 1-epimerase, at 777,687 to 778,914 16623 mRNA_8256: 16624 - K11324 DMAP1, SWC4, EAF2 DNA methyltransferase 1-associated protein 1, at 779,592 to 781,358 16624 mRNA_8257: 16625 - Hypothetical Protein, at 781,608 to 783,026 16625 mRNA_8258: 16626 - Hypothetical Protein, at 783,598 to 784,234 16626
Group Condition mRNA_8254 mRNA_8255 mRNA_8256 mRNA_8257 mRNA_8258
16622 16623 16624 16625 16626
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.1 N.D. -0.5 -0.9
growth on ypd YPD +0.2 -1.3 N.D. -0.3 +0.2
growth on oleic acid YNB Glucose -0.0 -0.1 N.D. -0.3 -0.6
auxotrophy YNB Glucose -0.1 -0.5 N.D. +0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.4 N.D. -0.2 -0.0
auxotrophy Dropout Complete +0.1 -0.3 N.D. +0.0 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.0 N.D. -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 N.D. -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.7 N.D. +0.3 +0.6
growth on oleic acid YNB Oleic Acid +0.1 +0.0 N.D. -0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.5 N.D. -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.3 N.D. -0.0 +0.0
growth on ricinoleic acid YNB Glucose +0.3 +0.1 N.D. +0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 N.D. +0.3 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.7 N.D. +0.1 +1.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.3 N.D. +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 N.D. +0.2 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.4 N.D. +0.4 +1.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.8 N.D. -0.5 +0.7
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.7 N.D. -0.2 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.3 N.D. +0.2 +1.4
remove
mRNA_8254
plot
remove
mRNA_8255
plot
remove
mRNA_8256
remove
mRNA_8257
plot
remove
mRNA_8258
plot