Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16624 and 16625 are separated by 249 nucleotides16625 and 16626 are separated by 571 nucleotides16626 and 16627 are separated by 163 nucleotides16627 and 16628 are separated by 361 nucleotides mRNA_8256: 16624 - K11324 DMAP1, SWC4, EAF2 DNA methyltransferase 1-associated protein 1, at 779,592 to 781,358 16624 mRNA_8257: 16625 - Hypothetical Protein, at 781,608 to 783,026 16625 mRNA_8258: 16626 - Hypothetical Protein, at 783,598 to 784,234 16626 mRNA_8259: 16627 - HMMPfam-DENN (AEX-3) domain-PF02141,ProSiteProfiles-DENN domain profile.-PS50211,SMART-Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN-SM00799, at 784,398 to 789,104 16627 mRNA_8260: 16628 - KOG2354 RNA Polymerase C (III) 37 kDa subunit, at 789,466 to 790,634 16628
Group Condition mRNA_8256 mRNA_8257 mRNA_8258 mRNA_8259 mRNA_8260
16624 16625 16626 16627 16628
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 -0.9 +0.0 N.D.
growth on oleic acid YNB Glucose N.D. -0.3 -0.6 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 -0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.0 -0.1 N.D.
auxotrophy YNB Glucose N.D. +0.1 -0.4 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.1 +0.0 N.D.
auxotrophy Dropout Complete N.D. +0.0 -0.3 +0.0 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.0 -0.0 -0.0 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.0 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.1 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 +0.0 +0.1 N.D.
growth on ypd YPD N.D. -0.3 +0.2 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 +0.7 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 +0.6 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 +0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 +0.6 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.3 +0.3 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.5 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +1.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 +1.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +1.4 -0.4 N.D.
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