Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16625 and 16626 are separated by 571 nucleotides16626 and 16627 are separated by 163 nucleotides16627 and 16628 are separated by 361 nucleotides16628 and 16629 are separated by 399 nucleotides mRNA_8257: 16625 - Hypothetical Protein, at 781,608 to 783,026 16625 mRNA_8258: 16626 - Hypothetical Protein, at 783,598 to 784,234 16626 mRNA_8259: 16627 - HMMPfam-DENN (AEX-3) domain-PF02141,ProSiteProfiles-DENN domain profile.-PS50211,SMART-Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN-SM00799, at 784,398 to 789,104 16627 mRNA_8260: 16628 - KOG2354 RNA Polymerase C (III) 37 kDa subunit, at 789,466 to 790,634 16628 mRNA_8261: 16629 - KOG0714 Molecular chaperone (DnaJ superfamily), at 791,034 to 792,171 16629
Group Condition mRNA_8257 mRNA_8258 mRNA_8259 mRNA_8260 mRNA_8261
16625 16626 16627 16628 16629
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.2 N.D. -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.9 +0.0 N.D. +0.3
growth on oleic acid YNB Glucose -0.3 -0.6 +0.1 N.D. -0.2
auxotrophy YNB Glucose +0.1 -0.4 -0.1 N.D. -0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 -0.1 N.D. -0.4
auxotrophy Dropout Complete +0.0 -0.3 +0.0 N.D. -0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 +0.0 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 +0.1 N.D. -0.5
growth on ricinoleic acid YNB Glucose +0.0 -0.0 -0.0 N.D. +0.1
growth on ypd YPD -0.3 +0.2 +0.2 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.0 +0.1 N.D. -0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.0 +0.1 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.7 +0.2 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.6 +0.1 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 +0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +1.1 -0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.6 -0.1 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.3 +0.3 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.5 +0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +1.4 -0.4 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +1.0 -0.2 N.D. +0.3
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